SMTL ID : 1y43.1

crystal structure of aspergilloglutamic peptidase from Aspergillus niger

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-oligomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: A.31 Chain B: Y.5, Y.31 2 PLIP interactions: 2 interactions with chain B Water bridges: B:E.3, B:D.33 SO4.2: 4 residues within 4Å: Chain A: S.4, N.6, W.7 Chain B: D.16 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.4, A:N.6, A:W.7, B:D.16 SO4.3: 5 residues within 4Å: Chain B: E.4, D.28, C.30, S.37, D.39 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.37, B:S.37 SO4.4: 1 residues within 4Å: Chain B: E.19 No protein-ligand interaction detected (PLIP) SO4.5: 2 residues within 4Å: Chain B: K.64, E.80 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.80 Water bridges: B:E.80 Salt bridges: B:K.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sasaki, H. et al., The three-dimensional structure of aspergilloglutamic peptidase from Aspergillus niger. Proc.Jpn.Acad.,Ser.B (2004)

Release Date

2005-12-13

Peptides

Aspergillopepsin II light chain: A
Aspergillopepsin II heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Aspergillopepsin II light chain

Aspergillopepsin II heavy chain

Related Entries With Identical Sequence