SMTL ID : 1y56.4 (3 other biounits)

Crystal structure of L-proline dehydrogenase from P.horikoshii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.86 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 7 residues within 4Å: Chain A: N.202, Y.308, A.309, F.333, S.334, G.335 Ligands: FAD.2 Ligand excluded by PLIP

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 36 residues within 4Å: Chain A: I.11, G.12, G.14, I.15, V.16, G.17, I.34, E.35, K.36, S.41, S.43, T.44, R.46, C.47, G.48, T.49, G.50, T.170, E.171, V.172, A.200, T.201, N.202, W.204, I.208, Y.251, G.306, Y.307, Y.308, F.333, G.335, H.336, G.337, F.338, M.339 Ligands: CL.1 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:Y.308 Hydrogen bonds: A:G.12, A:G.14, A:G.14, A:V.16, A:G.17, A:K.36, A:S.41, A:S.41, A:S.43, A:T.44, A:T.44, A:G.48, A:G.50, A:V.172, A:V.172, A:N.202, A:G.337, A:F.338, A:M.339 Water bridges: A:Y.87, A:A.203, A:A.203 pi-Cation interactions: A:K.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsuge, H. et al., Crystal structure of a novel FAD-, FMN-, and ATP-containing L-proline dehydrogenase complex from Pyrococcus horikoshii. J.Biol.Chem. (2005)

Release Date

2005-07-26

Peptides

sarcosine oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

sarcosine oxidase

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