SMTL ID : 1y5y.2 (1 other biounit)

Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-10-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: N.43 Chain B: N.43 Chain C: N.43 Chain D: N.43 Chain E: N.43 No protein-ligand interaction detected (PLIP) CA.4: 5 residues within 4Å: Chain F: N.43 Chain G: N.43 Chain H: N.43 Chain I: N.43 Chain J: N.43 No protein-ligand interaction detected (PLIP)

4 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain C: I.102, Q.142 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.142, C:N.146 NA.3: 2 residues within 4Å: Chain E: I.102, Q.142 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:Q.142, E:Q.142, E:N.146 NA.5: 2 residues within 4Å: Chain H: I.102, Q.142 2 PLIP interactions: 2 interactions with chain H Hydrogen bonds: H:Q.142, H:N.146 NA.6: 2 residues within 4Å: Chain J: I.102, Q.142 3 PLIP interactions: 3 interactions with chain J Hydrogen bonds: J:Q.142, J:Q.142, J:N.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Acharya, P. et al., How an enzyme binds the C1-carrier tetrahydromethanopterin: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1. J.Biol.Chem. (2005)

Release Date

2005-01-11

Peptides

Formaldehyde-activating enzyme fae: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
A

G
B

H
C

I
D

J
E

Formaldehyde-activating enzyme fae

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