SMTL ID : 1y7p.4 (3 other biounits)

1.9 A Crystal Structure of a Protein of Unknown Function AF1403 from Archaeoglobus fulgidus, Probable Metabolic Regulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-trimer

Ligands

3 x RIP: beta-D-ribopyranose(Non-covalent)

RIP.1: 5 residues within 4Å: Chain A: F.86, R.89, S.121, D.123, R.145 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.121, A:R.145 Salt bridges: A:R.89, A:R.145 RIP.3: 5 residues within 4Å: Chain B: R.89, D.123, T.124, M.125, L.143 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.124 Water bridges: B:R.89, B:R.89 Salt bridges: B:R.89 RIP.5: 5 residues within 4Å: Chain C: F.86, R.89, S.121, D.123, R.145 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:R.89, C:S.121, C:R.145 Water bridges: C:R.89 Salt bridges: C:R.89, C:R.145

3 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: M.203, H.204, S.206, A.209, F.211 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.203, A:H.204, A:S.206, A:A.209, A:F.211 ZN.4: 5 residues within 4Å: Chain B: M.203, H.204, S.206, A.209, F.211 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:M.203, B:H.204, B:S.206, B:A.209, B:F.211 ZN.6: 5 residues within 4Å: Chain C: M.203, H.204, S.206, A.209, F.211 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:M.203, C:S.206, C:A.209, C:F.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, R. et al., 1.9A crystal structure of a hypothetical protein AF1403 from Archaeoglobus fulgidus. To be Published

Release Date

2005-02-01

Peptides

Hypothetical protein AF1403: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
B

C
A

Hypothetical protein AF1403

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