SMTL ID : 1y81.1

Conserved hypothetical protein Pfu-723267-001 from Pyrococcus furiosus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.1: 6 residues within 4Å: Chain A: Q.100, C.124, I.125, M.126, V.127 Ligands: COA.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.100

1 x COA: COENZYME A(Non-covalent)

COA.2: 21 residues within 4Å: Chain A: V.20, G.21, S.23, K.28, Y.29, V.47, N.48, P.49, N.50, Y.51, V.76, V.77, P.78, V.81, V.85, Q.100, P.101, G.102, A.103, C.124 Ligands: SCN.1 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Y.29, A:A.103 Hydrogen bonds: A:G.21, A:S.23, A:S.23, A:N.48, A:N.50, A:Y.51, A:Q.100, A:P.101, A:G.102 Water bridges: A:K.28, A:K.28, A:G.30, A:N.50 Salt bridges: A:K.28, A:K.28, A:K.28

8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: I.32 No protein-ligand interaction detected (PLIP) UNX.5: 2 residues within 4Å: Chain A: E.43 Ligands: UNX.6 No protein-ligand interaction detected (PLIP) UNX.6: 5 residues within 4Å: Chain A: E.43, L.45 Ligands: UNX.5, UNX.7, UNX.8 No protein-ligand interaction detected (PLIP) UNX.7: 5 residues within 4Å: Chain A: V.44, L.45, L.57 Ligands: UNX.6, UNX.8 No protein-ligand interaction detected (PLIP) UNX.8: 5 residues within 4Å: Chain A: E.43, V.44 Ligands: UNX.6, UNX.7, UNX.9 No protein-ligand interaction detected (PLIP) UNX.9: 4 residues within 4Å: Chain A: L.38, L.57 Ligands: UNX.8, UNX.10 No protein-ligand interaction detected (PLIP) UNX.10: 1 residues within 4Å: Ligands: UNX.9 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, M. et al., Conserved hypothetical protein Pfu-723267-001 from Pyrococcus furiosus. To be published

Release Date

2005-01-25

Peptides

conserved hypothetical protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

conserved hypothetical protein