SMTL ID : 1y8n.1

Crystal structure of the PDK3-L2 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x K: POTASSIUM ION(Non-covalent)

K.1: 6 residues within 4Å: Chain A: S.33, R.34, F.35, N.72, V.384, F.385 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.33, A:F.35, A:F.385 K.3: 6 residues within 4Å: Chain C: S.33, R.34, F.35, N.72, V.384, F.385 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:S.33, C:F.35, C:F.385

2 x RED: DIHYDROLIPOIC ACID(Covalent)

RED.2: 6 residues within 4Å: Chain A: L.40, F.48, F.61, L.62 Chain B: K.68 Chain C: R.410 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.48 RED.4: 6 residues within 4Å: Chain A: R.410 Chain C: L.40, F.48, F.61, L.62 Chain D: K.68 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:F.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kato, M. et al., Crystal structure of pyruvate dehydrogenase kinase 3 bound to lipoyl domain 2 of human pyruvate dehydrogenase complex. Embo J. (2005)

Release Date

2005-05-24

Peptides

[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3: AC
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3

Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex

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