SMTL ID : 1yak.1 (1 other biounit)

Complex of Bacillus subtilis TenA with 4-amino-2-methyl-5-hydroxymethylpyrimidine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x HMH: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE(Non-covalent)

HMH.1: 8 residues within 4Å: Chain A: D.71, Y.74, L.75, C.162, Y.166, Y.190, E.232, F.235 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.74, A:F.235 Hydrogen bonds: A:D.71 Water bridges: A:D.71 pi-Stacking: A:Y.166 HMH.2: 7 residues within 4Å: Chain B: D.71, Y.74, L.75, C.162, Y.166, Y.190, E.232 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.166 Hydrogen bonds: B:D.71 pi-Stacking: B:Y.166 HMH.3: 8 residues within 4Å: Chain C: D.71, Y.74, L.75, C.162, Y.166, Y.190, E.232, F.235 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:Y.74, C:F.235 Hydrogen bonds: C:D.71 Water bridges: C:Y.190 pi-Stacking: C:Y.166 HMH.4: 7 residues within 4Å: Chain D: D.71, Y.74, L.75, C.162, Y.166, Y.190, E.232 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:Y.166 Hydrogen bonds: D:D.71 pi-Stacking: D:Y.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toms, A.V. et al., Structural characterization of the regulatory proteins TenA and TenI from Bacillus subtilis and identification of TenA as a thiaminase II. Biochemistry (2005)

Release Date

2005-02-22

Peptides

Transcriptional activator tenA: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transcriptional activator tenA

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