SMTL ID : 1yed.2 (1 other biounit)

STRUCTURE OF A CATALYTIC ANTIBODY IGG2A FAB FRAGMENT (D2.4)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PNB: 4-NITRO-BENZYLPHOSPHONOBUTANOYL-GLYCINE(Non-covalent)

PNB.1: 15 residues within 4Å: Chain A: Y.31, Y.37, N.39, V.94, G.96, Y.101, F.103 Chain B: H.35, L.37, W.47, T.97, W.99, F.101, Y.109, W.114 11 PLIP interactions: 7 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:Y.37, A:V.94, A:Y.101, B:F.101 Hydrogen bonds: A:N.39, A:G.96, A:Y.101, A:Y.101, B:W.99 pi-Stacking: B:W.99, B:W.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Charbonnier, J.B. et al., Structural convergence in the active sites of a family of catalytic antibodies. Science (1997)

Release Date

1997-10-15

Peptides

IGG1 FAB FRAGMENT (D.2.4): A
IGG1 FAB FRAGMENT (D.2.4): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IGG1 FAB FRAGMENT (D.2.4)

IGG1 FAB FRAGMENT (D.2.4)

Related Entries With Identical Sequence