SMTL ID : 1yeh.1 (1 other biounit)

STRUCTURE OF IGG2A FAB FRAGMENT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-1-1-mer

Ligands

7 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 4 residues within 4Å: Chain A: D.156, R.193 Ligands: ZN.5, ZN.7 No protein-ligand interaction detected (PLIP) ZN.2: 1 residues within 4Å: Ligands: ZN.4 No protein-ligand interaction detected (PLIP) ZN.3: 2 residues within 4Å: Chain A: H.54 Chain B: D.107 5 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: B:D.107, A:H.54, H2O.3, H2O.4, H2O.5 ZN.4: 2 residues within 4Å: Chain A: H.98 Ligands: ZN.2 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.98, H2O.2, H2O.3 ZN.5: 5 residues within 4Å: Chain A: D.156, R.193, H.194 Ligands: ZN.1, ZN.6 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.156, A:H.194, H2O.2, H2O.2 ZN.6: 2 residues within 4Å: Ligands: ZN.5, ZN.7 No protein-ligand interaction detected (PLIP) ZN.7: 2 residues within 4Å: Ligands: ZN.1, ZN.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gigant, B. et al., X-ray structures of a hydrolytic antibody and of complexes elucidate catalytic pathway from substrate binding and transition state stabilization through water attack and product release. Proc.Natl.Acad.Sci.USA (1997)

Release Date

1997-12-03

Peptides

FAB FRAGMENT: A
FAB FRAGMENT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

FAB FRAGMENT

FAB FRAGMENT

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