SMTL ID : 1yf0.1

Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-10-mer

Ligands

20 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.2: 7 residues within 4Å: Chain A: Y.38, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.3: 5 residues within 4Å: Chain A: A.167 Chain B: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.4: 7 residues within 4Å: Chain B: Y.38, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain C: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.6: 8 residues within 4Å: Chain C: Y.38, A.40, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.7: 3 residues within 4Å: Chain D: S.85, E.86, T.87 Ligand excluded by PLIP SO4.8: 7 residues within 4Å: Chain D: Y.38, C.46, P.47, E.49, L.50, R.119, R.142 Ligand excluded by PLIP SO4.9: 3 residues within 4Å: Chain E: S.85, E.86, T.87 Ligand excluded by PLIP SO4.10: 9 residues within 4Å: Chain E: Y.38, P.39, A.40, T.43, V.45, C.46, P.47, L.50, R.119 Ligand excluded by PLIP SO4.11: 4 residues within 4Å: Chain F: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.12: 7 residues within 4Å: Chain F: Y.38, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain F: A.167 Chain G: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.14: 7 residues within 4Å: Chain G: Y.38, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.15: 4 residues within 4Å: Chain H: P.47, S.85, E.86, T.87 Ligand excluded by PLIP SO4.16: 8 residues within 4Å: Chain H: Y.38, A.40, V.45, C.46, P.47, E.49, L.50, R.119 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain I: S.85, E.86, T.87 Ligand excluded by PLIP SO4.18: 7 residues within 4Å: Chain I: Y.38, C.46, P.47, E.49, L.50, R.119, R.142 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain J: S.85, E.86, T.87 Ligand excluded by PLIP SO4.20: 9 residues within 4Å: Chain J: Y.38, P.39, A.40, T.43, V.45, C.46, P.47, L.50, R.119 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parsonage, D. et al., Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin. Biochemistry (2005)

Release Date

2005-08-16

Peptides

Alkyl hydroperoxide reductase subunit C: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
A

G
B

H
C

I
D

J
E

Alkyl hydroperoxide reductase subunit C