SMTL ID : 1yht.1

Crystal structure analysis of Dispersin B

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 7 residues within 4Å: Chain A: D.183, E.184, W.216, W.237, Y.278, W.330 Ligands: GOL.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.183, A:W.216 Hydrogen bonds: A:D.183, A:D.183

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: R.27, V.280, W.330, E.332 Ligands: ACY.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.27, A:R.27 GOL.3: 5 residues within 4Å: Chain A: H.65, Y.94, E.166, D.169, I.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramasubbu, N. et al., Structural Analysis of Dispersin B, a Biofilm-releasing Glycoside Hydrolase from the Periodontopathogen Actinobacillus actinomycetemcomitans. J.Mol.Biol. (2005)

Release Date

2006-01-10

Peptides

DspB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DspB