SMTL ID : 1yk0.1

structure of natriuretic peptide receptor-C complexed with atrial natriuretic peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain B: S.64, L.66, D.265, N.293, S.295, S.296, E.351 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: S.64, L.66, R.71, N.293, E.351 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.293, A:E.351, A:E.351 NAG.3: 2 residues within 4Å: Chain A: N.394, A.408 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.394 NAG.5: 1 residues within 4Å: Chain B: N.394 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 6 residues within 4Å: Chain A: P.60, F.67, S.106, P.134, V.135, C.136 Ligand excluded by PLIP CL.6: 6 residues within 4Å: Chain B: P.60, F.67, S.106, P.134, V.135, C.136 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, X.L. et al., Structural determinants of natriuretic peptide receptor specificity and degeneracy. J.Mol.Biol. (2006)

Release Date

2006-04-18

Peptides

Atrial natriuretic peptide clearance receptor: AB
Atrial natriuretic factor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

Atrial natriuretic peptide clearance receptor

Atrial natriuretic factor