SMTL ID : 1yk1.1

structure of natriuretic peptide receptor-C complexed with brain natriuretic peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-2-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain B: S.63, L.65, S.263, N.292, S.294, S.295, E.350 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: S.263, N.292, S.295, E.350 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.263, A:S.295, A:S.295, A:E.350, A:E.350 NAG.3: 1 residues within 4Å: Chain A: N.393 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain B: N.393, A.407 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.393 Water bridges: B:T.395

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 7 residues within 4Å: Chain A: P.59, F.66, S.105, C.107, P.133, V.134, C.135 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: F.66, S.105, P.133, V.134, C.135 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, X.L. et al., Structural determinants of natriuretic peptide receptor specificity and degeneracy. J.Mol.Biol. (2006)

Release Date

2006-04-18

Peptides

Atrial natriuretic peptide clearance receptor: AB
Natriuretic peptides B: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

Atrial natriuretic peptide clearance receptor

Natriuretic peptides B