SMTL ID : 1yp0.1

Structure of the steroidogenic factor-1 ligand binding domain bound to phospholipid and a SHP peptide motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PEF: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

PEF.1: 18 residues within 4Å: Chain A: F.41, L.44, W.81, S.82, L.85, V.86, H.89, V.115, Q.118, A.119, G.120, L.123, L.126, A.130, A.212, Y.215, L.216, K.219 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.41, A:L.44, A:W.81, A:L.85, A:V.86, A:V.115, A:L.123, A:A.130, A:A.212, A:Y.215, A:L.216 Hydrogen bonds: A:G.120, A:Y.215, A:Y.215 Salt bridges: A:K.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1. Mol.Cell (2005)

Release Date

2005-04-19

Peptides

nuclear receptor subfamily 5, group A, member 1: A
Nuclear receptor subfamily 0, group B, member 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

nuclear receptor subfamily 5, group A, member 1

Nuclear receptor subfamily 0, group B, member 2