SMTL ID : 1yp7.1

Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

3 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: E.151 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.151, A:E.151, H2O.7, H2O.7, H2O.7 CD.2: 1 residues within 4Å: Chain A: S.140 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.140, H2O.2, H2O.4, H2O.7 CD.3: 3 residues within 4Å: Chain A: H.116, Q.127, H.153 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.116, A:H.153, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barratt, E. et al., Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water. J.Am.Chem.Soc. (2005)

Release Date

2005-08-30

Peptides

MAJOR URINARY PROTEIN 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MAJOR URINARY PROTEIN 1

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