SMTL ID : 1yqj.1

Crystal Structure of p38 Alpha in Complex with a Selective Pyridazine Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Y.188, R.226, T.227 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.188, A:T.227, A:T.227 Salt bridges: A:R.226

1 x 6NP: 6((S)-3-BENZYLPIPERAZIN-1-YL)-3-(NAPHTHALEN-2-YL)-4-(PYRIDIN-4-YL)PYRAZINE(Non-covalent)

6NP.2: 20 residues within 4Å: Chain A: Y.41, V.44, A.57, K.59, L.81, I.90, L.92, L.110, V.111, T.112, H.113, L.114, M.115, G.116, A.117, D.118, S.160, N.161, A.163, D.174 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.41, A:Y.41, A:Y.41, A:Y.41, A:V.44, A:A.57, A:K.59, A:L.81, A:I.90, A:L.92, A:L.110, A:T.112, A:M.115, A:D.118, A:A.163 Hydrogen bonds: A:K.59, A:M.115, A:S.160 pi-Cation interactions: A:K.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tamayo, N. et al., Design and synthesis of potent pyridazine inhibitors of p38 MAP kinase. Bioorg.Med.Chem.Lett. (2005)

Release Date

2005-04-26

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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