SMTL ID : 1yr2.1

Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Inter-Domain Dynamics in Catalysis and Specificity

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: P.589, D.590, F.592, A.593, Y.647, P.648, K.681 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.590, A:F.592 Water bridges: A:H.567, A:H.567, A:D.646, A:Y.647 GOL.2: 3 residues within 4Å: Chain A: R.175, G.195, A.197 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.175 Water bridges: A:G.195, A:A.197, A:D.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shan, L. et al., Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Interdomain Dynamics in Catalysis and Specificity. Proc.Natl.Acad.Sci.USA (2005)

Release Date

2005-03-15

Peptides

prolyl oligopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

prolyl oligopeptidase