SMTL ID : 1ysd.1

Yeast Cytosine Deaminase Double Mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.65, E.67 Ligands: ZN.2 No protein-ligand interaction detected (PLIP) ZN.2: 4 residues within 4Å: Chain A: H.65, C.94, C.97 Ligands: ZN.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.65, A:C.94, A:C.97, H2O.3 ZN.3: 4 residues within 4Å: Chain B: H.65, C.94, C.97 Ligands: ZN.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.65, B:C.94, B:C.97, H2O.9 ZN.4: 3 residues within 4Å: Chain B: H.65, E.67 Ligands: ZN.3 No protein-ligand interaction detected (PLIP)

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 1 residues within 4Å: Chain B: D.149 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.149, B:D.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korkegian, A. et al., Computational thermostabilization of an enzyme. Science (2005)

Release Date

2005-05-17

Peptides

Cytosine deaminase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cytosine deaminase