SMTL ID : 1ysq.1

The crystal structure of transcriptional regulator YaiJ

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: N.30, M.62, S.67, A.68, M.69, C.132, S.149 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.67, A:A.68, A:M.69, A:S.149, A:S.149, A:S.149 Water bridges: A:N.126 PO4.2: 7 residues within 4Å: Chain A: E.27, G.50, M.51, L.52, L.152, S.153, R.156 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:M.51, A:L.52, A:S.153, A:S.153 Water bridges: A:E.27 PO4.3: 6 residues within 4Å: Chain A: R.34, Y.73, F.76, G.77, R.143, V.144 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.73, A:V.144, A:V.144 Water bridges: A:R.34 Salt bridges: A:R.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bochkarev, A. et al., Structural study of effector binding specificity in IclR transcriptional regulators. To be Published

Release Date

2005-03-22

Peptides

HTH-type transcriptional regulator yiaJ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HTH-type transcriptional regulator yiaJ