SMTL ID : 1ytj.1

SIV PROTEASE CRYSTALLIZED WITH PEPTIDE PRODUCT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x PPN- GLU- ALA- NLE- SER: PEPTIDE PRODUCT(Non-covalent)

PPN-GLU-ALA-NLE-SER.1: 15 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, D.30, I.46, V.47, G.48, I.84 Chain B: R.8, L.23, D.25, P.81, I.82 Ligands: PPN-GLU-ALA-NLE-SER.2 11 PLIP interactions: 8 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:A.28, A:I.84, B:L.23, B:P.81 Hydrogen bonds: A:G.27, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48, B:D.25 PPN-GLU-ALA-NLE-SER.2: 15 residues within 4Å: Chain A: R.8, L.23, D.25, P.81, I.82 Chain B: D.25, G.27, A.28, D.29, D.30, I.46, V.47, G.48, I.84 Ligands: PPN-GLU-ALA-NLE-SER.1 10 PLIP interactions: 7 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:A.28, B:I.84, A:L.23, A:P.81 Hydrogen bonds: B:G.27, B:D.29, B:D.30, B:G.48, B:G.48, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rose, R.B. et al., Three-dimensional structures of HIV-1 and SIV protease product complexes. Biochemistry (1996)

Release Date

1997-03-12

Peptides

SIV PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SIV PROTEASE

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