SMTL ID : 1yvp.2 (1 other biounit)

Ro autoantigen complexed with RNAs

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 10 residues within 4Å: Chain D: Y.46, Y.47, S.378, A.379, S.380, G.443, S.444, T.445, N.473 Ligands: MG.2 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:Y.46, D:A.379 Hydrogen bonds: D:Y.47, D:S.380, D:N.473 Water bridges: D:S.378, D:S.380, D:T.445

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain D: S.378, S.380, T.445 Ligands: ACT.1 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:S.378, D:S.380, D:T.445, H2O.9, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stein, A.J. et al., Structural Insights into RNA Quality Control: The Ro Autoantigen Binds Misfolded RNAs via Its Central Cavity. Cell(Cambridge,Mass.) (2005)

Release Date

2005-06-07

Peptides

60-kDa SS-A/Ro ribonucleoprotein: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
B

60-kDa SS-A/Ro ribonucleoprotein

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