SMTL ID : 1yw0.1

Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-tetramer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain B: Y.5, L.6 Chain C: A.14, Q.15, Q.16, I.30, Q.34 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:A.14 MG.2: 6 residues within 4Å: Chain A: A.14, Q.15, Q.16, I.30 Chain D: Y.5, L.6 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain A Metal complexes: D:Y.5, A:A.14 MG.3: 3 residues within 4Å: Chain A: Y.5 Chain D: Q.16, L.18 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain D Metal complexes: A:Y.5, D:Q.16 MG.4: 8 residues within 4Å: Chain B: A.14, Q.15, Q.16, I.30 Chain C: Y.5, L.6, R.7 Ligands: MG.6 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C Metal complexes: B:A.14, C:Y.5 MG.5: 5 residues within 4Å: Chain B: E.84, L.86, R.224 Chain D: E.202, R.257 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:E.202 MG.6: 4 residues within 4Å: Chain B: Q.16, L.18 Chain C: Y.5 Ligands: MG.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:Q.16 MG.7: 4 residues within 4Å: Chain A: F.104, Q.105, S.106, R.110 No protein-ligand interaction detected (PLIP) MG.8: 6 residues within 4Å: Chain B: K.41 Chain C: L.12, S.13, A.14, Q.15, Q.16 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:Q.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vorobiev, S.M. et al., Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13. To be Published

Release Date

2005-03-15

Peptides

tryptophan 2,3-dioxygenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

tryptophan 2,3-dioxygenase