SMTL ID : 1yxj.1

Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) at low pH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: W.9, G.11 Chain B: W.9, H.10, F.49 Ligands: EDO.2 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Water bridges: A:G.11 Hydrogen bonds: B:W.9, B:H.10 EDO.2: 6 residues within 4Å: Chain A: W.9, H.10, F.49 Chain B: W.9, G.11 Ligands: EDO.1 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:W.9, B:G.11 Water bridges: A:G.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohki, I. et al., Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL. Structure (2005)

Release Date

2005-06-14

Peptides

oxidised low density lipoprotein (lectin-like) receptor 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

oxidised low density lipoprotein (lectin-like) receptor 1