SMTL ID : 1yxl.1

Crystal structure of a novel phospholipase A2 from Naja naja sagittifera at 1.5 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: Y.27, G.29, K.30, G.31, D.48 Ligands: ACY.3 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:G.29, A:G.31, A:D.48, H2O.2, ACY.3

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: E.53, N.56 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.56

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 6 residues within 4Å: Chain A: Y.27, G.29, H.47, D.48, Y.63 Ligands: CA.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.29 Salt bridges: A:H.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, R.K. et al., Crystal Structure of a novel phospholipase A2 from Naja naja sagittifera at 1.5 A resolution. To be Published

Release Date

2005-03-08

Peptides

Phospholipase A2 isoform 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipase A2 isoform 3

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