SMTL ID : 1yzt.2 (1 other biounit)

GppNHp-Bound Rab21 GTPase at 2.05 A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.34, T.52, D.75 Ligands: GNP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.34, A:T.52, H2O.1, H2O.3

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.2: 23 residues within 4Å: Chain A: E.28, G.29, C.30, V.31, G.32, K.33, T.34, S.35, F.45, N.46, D.47, K.48, H.49, T.51, T.52, N.133, K.134, D.136, L.137, S.163, A.164, K.165 Ligands: MG.1 33 PLIP interactions: 33 interactions with chain A Hydrogen bonds: A:G.29, A:V.31, A:G.32, A:K.33, A:K.33, A:T.34, A:T.34, A:S.35, A:S.35, A:N.46, A:T.52, A:T.52, A:N.133, A:K.134, A:K.134, A:A.164, A:K.165 Water bridges: A:K.33, A:T.34, A:T.34, A:D.47, A:D.47, A:I.50, A:I.50, A:T.51, A:T.52, A:T.52, A:T.76, A:K.165 Salt bridges: A:H.49, A:D.136 pi-Stacking: A:F.45, A:F.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eathiraj, S. et al., Structural basis of family-wide Rab GTPase recognition by rabenosyn-5. Nature (2005)

Release Date

2005-07-26

Peptides

Ras-related protein Rab-21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ras-related protein Rab-21

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