SMTL ID : 1z0i.1

GDP-Bound Rab21 GTPase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.20, D.61 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.20, H2O.1, H2O.1, H2O.2, H2O.2

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 19 residues within 4Å: Chain A: E.14, G.15, C.16, V.17, G.18, K.19, T.20, S.21, F.31, N.32, D.33, N.119, K.120, D.122, L.123, S.149, A.150, K.151 Ligands: MG.1 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:C.16, A:V.17, A:G.18, A:K.19, A:T.20, A:S.21, A:S.21, A:N.32, A:D.33, A:N.119, A:K.120, A:K.120, A:A.150, A:K.151 Water bridges: A:K.19, A:K.19, A:K.19, A:T.20, A:T.37 Salt bridges: A:K.19, A:D.122 pi-Stacking: A:F.31, A:F.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eathiraj, S. et al., Structural basis of family-wide Rab GTPase recognition by rabenosyn-5. Nature (2005)

Release Date

2005-07-26

Peptides

Ras-related protein Rab-21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ras-related protein Rab-21

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