SMTL ID : 1z1c.1 (3 other biounits)

Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus Minute virus of Mice

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

monomer

Ligands

1 x DA- DC- DA- DC- DC- DA- DA- DA- DA: 5'-D(*AP*CP*AP*CP*CP*AP*AP*AP*A)-3'(Non-functional Binders)

DA-DC-DA-DC-DC-DA-DA-DA-DA.1: 5 residues within 4Å: Chain A: C.3, C.4, T.9, A.11, C.12 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.53, B:Y.53, B:Y.53

2 x CA: CALCIUM ION(Non-functional Binders)

CA.2: 4 residues within 4Å: Chain A: C.4, C.6, T.7, T.9 No protein-ligand interaction detected (PLIP) CA.3: 3 residues within 4Å: Chain A: T.2, C.3, T.9 No protein-ligand interaction detected (PLIP)

1 x D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE(Non-functional Binders)

D5M.4: 4 residues within 4Å: Chain A: A.8, C.10, A.11, C.12 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kontou, M. et al., Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice. J.Virol. (2005)

Release Date

2005-09-06

Peptides

Coat protein VP2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

Coat protein VP2

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