SMTL ID : 1z1f.1

Crystal structure of stilbene synthase from Arachis hypogaea (resveratrol-bound form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x STL: RESVERATROL(Non-covalent)

STL.1: 19 residues within 4Å: Chain A: C.165, E.193, N.194, T.195, T.198, F.216, A.217, D.218, I.255, G.256, G.257, L.264, T.265, F.266, L.268, N.337, M.338, S.339 Chain B: L.138 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:E.193, A:T.195, A:T.198, A:F.216, A:I.255, A:L.264 Hydrogen bonds: A:N.194, A:D.218, A:G.256 Water bridges: A:N.194 STL.3: 19 residues within 4Å: Chain A: L.138 Chain B: C.165, E.193, N.194, T.195, T.198, F.216, A.217, D.218, I.255, G.256, G.257, L.264, T.265, F.266, L.268, N.337, M.338, S.339 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:E.193, B:T.195, B:T.198, B:F.216, B:I.255, B:L.264 Hydrogen bonds: B:N.194, B:G.256 Water bridges: B:N.194

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 8 residues within 4Å: Chain A: W.118, Q.120, K.124, D.184, R.186, D.228, V.230, E.234 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:D.184, A:R.186, A:V.230 Hydrogen bonds: A:D.184, A:D.184 Salt bridges: A:K.124, A:K.124, A:R.186, A:R.186 CIT.4: 8 residues within 4Å: Chain B: W.118, Q.120, K.124, D.184, R.186, D.228, V.230, E.234 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:D.184, B:R.186, B:V.230 Hydrogen bonds: B:D.184 Salt bridges: B:K.124, B:K.124, B:R.186, B:R.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shomura, Y. et al., Crystal structure of stilbene synthase from Arachis hypogaea. Proteins (2005)

Release Date

2005-08-30

Peptides

stilbene synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

stilbene synthase

Related Entries With Identical Sequence