SMTL ID : 1z1l.1

The Crystal Structure of the Phosphodiesterase 2A Catalytic Domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.86, H.122, D.123, D.234 Ligands: MG.2, PO4.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.86, A:H.122, A:D.123, A:D.234, H2O.10

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.123 Ligands: ZN.1, PO4.3 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.123, H2O.10, H2O.10, H2O.10, H2O.10

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 7 residues within 4Å: Chain A: Y.81, H.82, H.86, D.123, D.234 Ligands: ZN.1, MG.2 3 PLIP interactions: 3 interactions with chain A Water bridges: A:H.82, A:D.234 Salt bridges: A:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iffland, A. et al., Structural Determinants for Inhibitor Specificity and Selectivity in PDE2A Using the Wheat Germ in Vitro Translation System. Biochemistry (2005)

Release Date

2005-06-21

Peptides

cGMP-dependent 3',5'-cyclic phosphodiesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cGMP-dependent 3',5'-cyclic phosphodiesterase