SMTL ID : 1z1y.1

Crystal structure of Methylated Pvs25, an ookinete protein from Plasmodium vivax

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

9 x YB: YTTERBIUM (III) ION(Non-functional Binders)(Non-covalent)

YB.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) YB.2: 2 residues within 4Å: Chain A: D.130, E.131 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.130, A:E.131, H2O.1 YB.3: 3 residues within 4Å: Ligands: YB.4, YB.5, YB.6 No protein-ligand interaction detected (PLIP) YB.4: 3 residues within 4Å: Ligands: YB.3, YB.5, YB.6 No protein-ligand interaction detected (PLIP) YB.5: 3 residues within 4Å: Ligands: YB.3, YB.4, YB.6 No protein-ligand interaction detected (PLIP) YB.6: 4 residues within 4Å: Chain A: E.112 Ligands: YB.3, YB.4, YB.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.112 YB.7: 1 residues within 4Å: Chain A: D.67 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.67, A:D.67 YB.8: 1 residues within 4Å: Chain B: D.87 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.87, B:D.87, H2O.4 YB.9: 1 residues within 4Å: Chain B: D.92 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saxena, A.K. et al., The essential mosquito-stage P25 and P28 proteins from Plasmodium form tile-like triangular prisms. Nat.Struct.Mol.Biol. (2006)

Release Date

2005-12-06

Peptides

ookinete surface protein Pvs25: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ookinete surface protein Pvs25

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