SMTL ID : 1z2a.1

GDP-Bound Rab23 GTPase crystallized in P2(1)2(1)2(1) space group

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.19 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.19, H2O.1, H2O.1, H2O.1, H2O.1

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 23 residues within 4Å: Chain A: N.13, G.14, A.15, V.16, G.17, K.18, S.19, S.20, F.30, T.31, D.33, Y.34, K.35, K.36, E.65, N.117, K.118, D.120, L.121, S.147, V.148, K.149 Ligands: MG.1 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:N.13, A:A.15, A:V.16, A:G.17, A:K.18, A:S.19, A:S.20, A:S.20, A:Y.34, A:K.36, A:K.36, A:K.36, A:N.117, A:K.118, A:K.118, A:V.148, A:K.149 Water bridges: A:K.18, A:K.18, A:S.19 Salt bridges: A:K.18, A:D.120 pi-Stacking: A:F.30, A:F.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eathiraj, S. et al., Structural basis of family-wide Rab GTPase recognition by rabenosyn-5. Nature (2005)

Release Date

2005-07-26

Peptides

Ras-related protein Rab-23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ras-related protein Rab-23

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