SMTL ID : 1z6i.1

Crystal structure of the ectodomain of Drosophila transmembrane receptor PGRP-LCa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.36, C.37, S.38, I.109 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.36 Water bridges: A:S.38, A:S.38

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.60, C.61, R.79, A.86 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:C.61, A:D.62 Salt bridges: A:R.79 SO4.3: 5 residues within 4Å: Chain A: S.105, F.106, K.107, T.108, I.109 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.105, A:K.107, A:T.108, A:T.108, A:I.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C.-I. et al., Structure of the ectodomain of Drosophila peptidoglycan-recognition protein LCa suggests a molecular mechanism for pattern recognition. Proc.Natl.Acad.Sci.Usa (2005)

Release Date

2005-07-19

Peptides

Peptidoglycan-recognition protein-LC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan-recognition protein-LC

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