- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x UGA: URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID(Non-covalent)
UGA.2: 26 residues within 4Å:- Chain A: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:A.393, A:Y.398, A:Y.398, A:T.432, A:T.432, A:S.433, A:S.433, A:S.433, A:R.460, A:Y.463, A:N.492, A:N.492, A:W.493, A:A.511, A:K.526, A:I.528, A:R.535, A:Y.609, A:Y.613, A:Y.613
- Salt bridges: A:R.460, A:R.535, A:R.619, A:R.619, A:R.619
UGA.4: 26 residues within 4Å:- Chain B: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
25 PLIP interactions:25 interactions with chain B- Hydrogen bonds: B:Y.398, B:Y.398, B:T.432, B:T.432, B:S.433, B:S.433, B:S.433, B:E.434, B:R.460, B:Y.463, B:N.492, B:N.492, B:W.493, B:A.511, B:K.526, B:I.528, B:R.535, B:Y.609, B:Y.613, B:Y.613
- Salt bridges: B:R.460, B:R.535, B:R.619, B:R.619, B:R.619
UGA.6: 26 residues within 4Å:- Chain C: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
24 PLIP interactions:24 interactions with chain C- Hydrogen bonds: C:Y.398, C:T.432, C:T.432, C:S.433, C:S.433, C:S.433, C:E.434, C:E.434, C:R.460, C:N.492, C:N.492, C:W.493, C:A.511, C:K.526, C:I.528, C:R.535, C:Y.609, C:Y.613, C:Y.613
- Salt bridges: C:R.460, C:R.535, C:R.619, C:R.619, C:R.619
UGA.8: 26 residues within 4Å:- Chain D: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
26 PLIP interactions:26 interactions with chain D- Hydrophobic interactions: D:A.511
- Hydrogen bonds: D:Y.398, D:Y.398, D:T.432, D:T.432, D:S.433, D:S.433, D:S.433, D:E.434, D:R.460, D:Y.463, D:N.492, D:N.492, D:W.493, D:A.511, D:K.526, D:I.528, D:R.535, D:Y.609, D:Y.613, D:Y.613
- Salt bridges: D:R.460, D:R.535, D:R.619, D:R.619, D:R.619
UGA.10: 26 residues within 4Å:- Chain E: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
24 PLIP interactions:24 interactions with chain E- Hydrogen bonds: E:Y.398, E:Y.398, E:T.432, E:T.432, E:S.433, E:S.433, E:S.433, E:R.460, E:Y.463, E:N.492, E:N.492, E:W.493, E:A.511, E:K.526, E:I.528, E:R.535, E:Y.609, E:Y.613, E:Y.613
- Salt bridges: E:R.460, E:R.535, E:R.619, E:R.619, E:R.619
UGA.12: 26 residues within 4Å:- Chain F: A.393, P.395, Y.398, T.432, S.433, E.434, R.460, Y.463, P.490, F.491, N.492, W.493, R.510, A.511, Q.514, L.515, K.526, L.527, I.528, Q.533, R.535, I.574, Y.609, Y.613, D.615, R.619
23 PLIP interactions:23 interactions with chain F- Hydrogen bonds: F:Y.398, F:T.432, F:T.432, F:S.433, F:S.433, F:S.433, F:E.434, F:R.460, F:N.492, F:N.492, F:W.493, F:A.511, F:K.526, F:I.528, F:R.535, F:Y.609, F:Y.613, F:Y.613
- Salt bridges: F:R.460, F:R.535, F:R.619, F:R.619, F:R.619
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gatzeva-Topalova, P.Z. et al., Structure and Mechanism of ArnA: Conformational Change Implies Ordered Dehydrogenase Mechanism in Key Enzyme for Polymyxin Resistance. Structure (2005)
- Release Date
- 2005-06-07
- Peptides
- protein ArnA: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x UGA: URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gatzeva-Topalova, P.Z. et al., Structure and Mechanism of ArnA: Conformational Change Implies Ordered Dehydrogenase Mechanism in Key Enzyme for Polymyxin Resistance. Structure (2005)
- Release Date
- 2005-06-07
- Peptides
- protein ArnA: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F