SMTL ID : 1z8o.1

Ferrous dioxygen complex of the wild-type cytochrome P450eryF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: M.90, G.91, H.98, R.102, F.109, I.153, A.241, G.242, A.245, L.249, L.282, P.288, R.293, S.343, F.344, G.345, I.348, H.349, C.351, M.352, G.353, A.357 Ligands: OXY.2, DEB.3 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:F.109, A:F.109, A:I.153, A:A.245, A:L.249, A:L.282, A:F.344, A:A.357 Salt bridges: A:H.98, A:R.102, A:R.293, A:H.349 Metal complexes: A:C.351

1 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.2: 4 residues within 4Å: Chain A: A.241, A.245 Ligands: HEM.1, DEB.3 No protein-ligand interaction detected (PLIP)

1 x DEB: 6-DEOXYERYTHRONOLIDE B(Non-covalent)

DEB.3: 16 residues within 4Å: Chain A: A.74, Y.75, N.89, G.91, T.92, I.174, L.175, R.185, V.237, A.241, A.245, P.288, L.391, L.392 Ligands: HEM.1, OXY.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.74, A:Y.75, A:T.92, A:I.174, A:L.175, A:V.237, A:A.241, A:P.288, A:L.391 Hydrogen bonds: A:N.89, A:G.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagano, S. et al., Crystal structures of the ferrous dioxygen complex of wild-type cytochrome P450eryF and its mutants, A245S and A245T: investigation of the proton transfer system in P450eryF. J.Biol.Chem. (2005)

Release Date

2005-04-12

Peptides

6-deoxyerythronolide B hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

6-deoxyerythronolide B hydroxylase