SMTL ID : 1zag.2 (3 other biounits)

HUMAN ZINC-ALPHA-2-GLYCOPROTEIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- NAG- GAL- SIA- MAN- NAG: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-GAL-SIA-MAN-NAG.1: 11 residues within 4Å: Chain A: V.186, T.188, K.200, L.202, Y.204, D.205, H.232, N.235, T.237, Q.239, W.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.204, A:K.200, A:K.200 Hydrophobic interactions: A:K.200

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: Y.83, Y.84, N.85 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.83, A:Y.84 Hydrogen bonds: A:Y.83 NAG.3: 3 residues within 4Å: Chain A: D.1, N.104, R.167 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sanchez, L.M. et al., Crystal structure of human ZAG, a fat-depleting factor related to MHC molecules. Science (1999)

Release Date

1999-03-31

Peptides

PROTEIN (ZINC-ALPHA-2-GLYCOPROTEIN): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PROTEIN (ZINC-ALPHA-2-GLYCOPROTEIN)

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