SMTL ID : 1zde.1

1.95 Angstrom Crystal Structure of a dnaE Intein Precursor from Synechocystis Sp. Pcc 6803

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.58, D.150, C.170 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.58, A:D.150, A:D.150, A:C.170

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: E.108 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.108, H2O.2, H2O.3, H2O.3, H2O.3 CA.3: 2 residues within 4Å: Chain A: E.71, M.134 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:M.134, H2O.3, H2O.3, H2O.3, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, P. et al., Crystal structures of an intein from the split dnaE gene of Synechocystis sp. PCC6803 reveal the catalytic model without the penultimate histidine and the mechanism of zinc ion inhibition of protein splicing. J.Mol.Biol. (2005)

Release Date

2006-01-24

Peptides

DNA polymerase III alpha subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA polymerase III alpha subunit