SMTL ID : 1zeo.1

Crystal Structure of Human PPAR-gamma Ligand Binding Domain Complexed with an Alpha-Aryloxyphenylacetic Acid Agonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x C01: (2S)-(4-ISOPROPYLPHENYL)[(2-METHYL-3-OXO-5,7-DIPROPYL-2,3-DIHYDRO-1,2-BENZISOXAZOL-6-YL)OXY]ACETATE(Non-covalent)

C01.1: 16 residues within 4Å: Chain A: A.78, I.81, F.82, C.85, Q.86, R.88, S.89, H.123, I.126, L.130, F.160, F.163, M.164, H.249, L.269, Y.273 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.82, A:F.82, A:Q.86, A:R.88, A:L.130, A:L.130, A:F.163 Hydrogen bonds: A:S.89, A:Y.127, A:Y.273 Water bridges: A:F.163 Salt bridges: A:H.123, A:H.249 pi-Stacking: A:F.163, A:F.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, G.Q. et al., Design and Synthesis of alpha-Aryloxyphenylacetic Acid Derivatives: A Novel Class of PPAR alpha/gamma Dual Agonists with Potent Antihyperglycemic and Lipid Modulating Activity. J.Med.Chem. (2005)

Release Date

2006-04-25

Peptides

Peroxisome proliferator activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator activated receptor gamma

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