SMTL ID : 1ziv.1

Catalytic Domain of Human Calpain-9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.276, D.283, L.304, D.306, E.308 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.276, A:D.283, A:L.304, A:D.306, A:E.308 CA.2: 4 residues within 4Å: Chain A: L.73, G.75, D.80, E.159 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.75, A:D.80, A:E.159, A:E.159, H2O.2

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 6 residues within 4Å: Chain A: G.84, L.86, G.87, C.89, L.92, E.166 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.84, A:G.87 Water bridges: A:L.86 BME.4: 7 residues within 4Å: Chain A: E.189, T.192, G.194, V.195, A.196, C.326, N.327 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.192, A:N.327

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davis, T.L. et al., The crystal structures of human calpains 1 and 9 imply diverse mechanisms of action and auto-inhibition. J.Mol.Biol. (2007)

Release Date

2005-07-05

Peptides

Calpain 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Calpain 9