- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.64 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x HG: MERCURY (II) ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 5 residues within 4Å:- Chain A: T.58, F.60, C.148
- Ligands: HG.3, CL.6
Ligand excluded by PLIPCL.6: 3 residues within 4Å:- Chain A: C.148, V.149
- Ligands: CL.2
Ligand excluded by PLIPCL.12: 5 residues within 4Å:- Chain B: T.58, F.60, C.148
- Ligands: HG.13, CL.16
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain B: C.148, V.149
- Ligands: CL.12
Ligand excluded by PLIP- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x DR4: METHYL 9-(BETA-D-TALOPYRANOSYLOXY)NONANOATE(Non-covalent)
DR4.9: 13 residues within 4Å:- Chain A: H.172, G.174, F.175, T.184, Y.203, L.205, W.239, E.242, L.263, D.265, L.268, L.269
- Ligands: UDP.10
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.175, A:D.265, A:L.268, A:L.269, A:L.269
- Hydrogen bonds: A:T.184, A:E.242
- Salt bridges: A:H.172, A:H.172
DR4.19: 13 residues within 4Å:- Chain B: H.172, G.174, F.175, T.184, Y.203, L.205, W.239, E.242, L.263, D.265, L.268, L.269
- Ligands: UDP.20
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:F.175, B:D.265, B:L.268, B:L.269, B:L.269
- Hydrogen bonds: B:T.184, B:T.184, B:E.242
- Salt bridges: B:H.172, B:H.172
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
UDP.10: 10 residues within 4Å:- Chain A: F.60, A.61, I.62, K.64, Y.65, D.150, V.151, D.152
- Ligands: MN.8, DR4.9
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:Y.65
- Hydrogen bonds: A:F.60, A:I.62, A:I.62, A:K.64, A:Y.65, A:V.151, A:D.152, A:D.152
- Water bridges: A:F.60
UDP.20: 10 residues within 4Å:- Chain B: F.60, A.61, I.62, K.64, Y.65, D.150, V.151, D.152
- Ligands: MN.18, DR4.19
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:Y.65
- Hydrogen bonds: B:F.60, B:I.62, B:I.62, B:K.64, B:V.151, B:D.152, B:D.152
- Water bridges: B:F.60, B:D.150
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Letts, J.A. et al., Differential Recognition of the Type I and II H Antigen Acceptors by the Human ABO(H) Blood Group A and B Glycosyltransferases. J.Biol.Chem. (2006)
- Release Date
- 2005-12-13
- Peptides
- Histo-blood group ABO system transferase (NAGAT) Includes: Glycoprotein-fucosylgalactoside alpha-N- acetylgalactosaminyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.64 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x HG: MERCURY (II) ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x DR4: METHYL 9-(BETA-D-TALOPYRANOSYLOXY)NONANOATE(Non-covalent)
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Letts, J.A. et al., Differential Recognition of the Type I and II H Antigen Acceptors by the Human ABO(H) Blood Group A and B Glycosyltransferases. J.Biol.Chem. (2006)
- Release Date
- 2005-12-13
- Peptides
- Histo-blood group ABO system transferase (NAGAT) Includes: Glycoprotein-fucosylgalactoside alpha-N- acetylgalactosaminyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A