SMTL ID : 1zlf.1

Crystal structure of a complex of mutant HIV-1 protease (A71V, V82T, I84V) with a hydroxyethylamine peptidomimetic inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x 0ZR: N-{(2R,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-glutaminyl-L-phenylalaninamide(Non-covalent)

0ZR.1: 25 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, F.53 Chain B: R.8, D.25, G.27, A.28, D.30, V.32, I.47, G.48, G.49, I.50, P.81, T.82, V.84 24 PLIP interactions: 14 interactions with chain A, 10 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.47, A:I.50, A:F.53, B:D.30, B:V.32, B:I.47, B:P.81, B:T.82, B:V.84 Hydrogen bonds: A:G.27, A:D.29, A:D.29, A:D.29, A:D.30, A:D.30, A:G.48, A:G.48, A:I.50, B:G.27, B:G.27 Water bridges: B:D.29, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skalova, T. et al., HIV-1 protease mutations and inhibitor modifications monitored on a series of complexes. Structural basis for the effect of the A71V mutation on the active site. J.Med.Chem. (2006)

Release Date

2006-04-25

Peptides

PROTEASE RETROPEPSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE RETROPEPSIN

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