SMTL ID : 1zly.1

The structure of human glycinamide ribonucleotide transformylase in complex with alpha,beta-N-(hydroxyacetyl)-D-ribofuranosylamine and 10-formyl-5,8,dideazafolate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x GRF: 5-O-phosphono-beta-D-ribofuranosylamine(Non-covalent)

GRF.1: 8 residues within 4Å: Chain A: G.11, S.12, N.13, A.86, G.87, I.107, P.109, E.173 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.11, A:S.12, A:S.12, A:N.13, A:N.13, A:A.86, A:G.87, A:I.107, A:E.173, A:E.173 Water bridges: A:S.12, A:S.12, A:L.14, A:F.88, A:K.170

1 x DQB: 4-[(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN-6-YL)METHYL]AMINO}BENZOYL)AMINO]BUTANOIC ACID(Non-covalent)

DQB.2: 13 residues within 4Å: Chain A: L.85, F.88, R.90, I.91, L.92, V.97, N.106, V.139, A.140, E.141, D.142, V.143, D.144 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.85, A:V.139, A:V.143 Hydrogen bonds: A:I.91, A:L.92, A:L.92, A:A.140, A:D.144, A:D.144, A:D.144 Water bridges: A:M.89, A:S.118, A:H.137, A:A.140 Salt bridges: A:R.64, A:R.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dahms, T.E. et al., The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase. Biochemistry (2005)

Release Date

2005-08-23

Peptides

Phosphoribosylglycinamide formyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoribosylglycinamide formyltransferase

Related Entries With Identical Sequence