SMTL ID : 1zm5.1

Conjugative Relaxase TRWC in complex with ORIT dna, cooper-bound structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.22, C.24, T.25 Chain B: S.3, T.87, S.89 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.3, B:S.89 Water bridges: B:S.3, B:S.3, B:K.262

1 x CU: COPPER (II) ION(Non-covalent)

CU.2: 3 residues within 4Å: Chain B: H.150, H.161, H.163 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.150, B:H.161, B:H.163, H2O.7, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boer, R. et al., Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of TrwC Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site. J.Mol.Biol. (2006)

Release Date

2006-04-25

Peptides

TrwC: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

TrwC

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