SMTL ID : 1zn8.1

Human Adenine Phosphoribosyltransferase Complexed with AMP, in Space Group P1 at 1.76 A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 14 residues within 4Å: Chain A: V.24, V.25, F.26, R.27, R.67, D.127, D.128, L.129, A.131, T.132, G.133, G.134, T.135, L.159 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:V.25, A:R.27, A:R.67, A:R.67, A:D.127, A:D.128, A:A.131, A:T.132, A:T.132, A:G.133, A:G.134, A:T.135, A:T.135 Water bridges: A:K.88, A:T.132, A:T.132, A:M.136 AMP.3: 13 residues within 4Å: Chain B: V.25, F.26, R.27, R.67, D.127, D.128, L.129, A.131, T.132, G.133, G.134, T.135, L.159 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:V.25, B:R.27, B:R.67, B:D.128, B:A.131, B:T.132, B:T.132, B:T.132, B:G.133, B:G.134, B:T.135, B:T.135 Water bridges: B:D.127, B:D.127, B:T.132, B:T.132, B:T.132, B:M.136 pi-Stacking: B:F.26

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain B: W.98, R.145 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Silva, C.H. et al., Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism. J.Biomol.Struct.Dyn. (2008)

Release Date

2006-04-25

Peptides

Adenine phosphoribosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Adenine phosphoribosyltransferase

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