SMTL ID : 1zuc.1

Progesterone receptor ligand binding domain in complex with the nonsteroidal agonist tanaproget

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x T98: 5-(4,4-DIMETHYL-2-THIOXO-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-6-YL)-1-METHYL-1H-PYRROLE-2-CARBONITRILE(Non-covalent)

T98.1: 17 residues within 4Å: Chain A: L.41, L.44, N.45, L.47, Q.51, M.82, M.85, V.86, L.89, R.92, F.104, L.123, L.213, Y.216, C.217, T.220, F.231 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.41, A:M.85, A:L.89 Hydrogen bonds: A:N.45, A:Q.51, A:R.92 Water bridges: A:R.92 T98.3: 15 residues within 4Å: Chain B: L.41, L.44, N.45, Q.51, M.85, V.86, L.89, R.92, F.104, L.123, L.213, Y.216, C.217, T.220, F.231 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.41, B:M.85, B:L.89 Hydrogen bonds: B:N.45, B:Q.51, B:R.92 Water bridges: B:R.92 pi-Stacking: B:F.104

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain B: P.63, G.64, R.66, N.67 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.64 Salt bridges: B:R.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Molecular and pharmacological properties of a potent and selective novel nonsteroidal progesterone receptor agonist tanaproget. J.Biol.Chem. (2005)

Release Date

2005-07-05

Peptides

Progesterone receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Progesterone receptor

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