- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 5 x GAI: GUANIDINE(Non-covalent)
GAI.2: 4 residues within 4Å:- Chain A: D.147, F.150
- Chain B: V.458, F.459
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:F.459, B:F.459, A:D.147
- Water bridges: A:D.147
GAI.5: 5 residues within 4Å:- Chain B: F.70, E.157, P.158, V.159, K.487
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:P.158, B:P.158, B:K.487, A:Q.447
- Water bridges: B:R.77
- Salt bridges: B:E.157
GAI.6: 6 residues within 4Å:- Chain A: V.458, F.459, G.460
- Chain B: I.146, D.147, F.150
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:F.459, A:F.459, B:D.147, B:D.147
GAI.11: 5 residues within 4Å:- Chain C: I.146, D.147, F.150
- Chain D: V.458, F.459
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:F.459, D:F.459, C:D.147
- Water bridges: C:D.147
GAI.16: 5 residues within 4Å:- Chain C: V.458, F.459
- Chain D: I.146, D.147, F.150
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:D.147, C:F.459, C:F.459
- Water bridges: D:D.147
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 6 residues within 4Å:- Chain A: N.41, T.44, E.46, V.47, I.48, L.108
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.46
EDO.7: 5 residues within 4Å:- Chain A: S.443
- Chain B: Y.153, R.155, V.491
- Chain C: F.151
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:S.443, B:Y.153, B:R.155
EDO.8: 7 residues within 4Å:- Chain B: Q.14, N.41, T.44, E.46, V.47, I.48, L.108
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.14, B:N.41
EDO.9: 3 residues within 4Å:- Chain B: F.18, Y.101, Y.203
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.203
EDO.12: 6 residues within 4Å:- Chain B: F.151
- Chain C: Y.153, R.155, V.491
- Chain D: N.440, S.443
3 PLIP interactions:1 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:S.443, C:Y.153, C:R.155
EDO.13: 7 residues within 4Å:- Chain C: Q.14, N.41, T.44, E.46, V.47, I.48, L.108
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.41, C:E.46, C:E.46
EDO.14: 3 residues within 4Å:- Chain C: F.18, Y.101, Y.203
2 PLIP interactions:2 interactions with chain C- Water bridges: C:D.98, C:Y.101
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Larson, H.N. et al., Disruption of the coenzyme binding site and dimer interface revealed in the crystal structure of mitochondrial aldehyde dehydrogenase "asian" variant. J.Biol.Chem. (2005)
- Release Date
- 2005-06-28
- Peptides
- Aldehyde dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 5 x GAI: GUANIDINE(Non-covalent)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Larson, H.N. et al., Disruption of the coenzyme binding site and dimer interface revealed in the crystal structure of mitochondrial aldehyde dehydrogenase "asian" variant. J.Biol.Chem. (2005)
- Release Date
- 2005-06-28
- Peptides
- Aldehyde dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H