- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NGA- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 3 residues within 4Å:- Chain A: Y.37
- Ligands: NGA-GAL.1, NGA-GAL.1
No protein-ligand interaction detected (PLIP)SO4.3: 3 residues within 4Å:- Chain A: S.128, T.129, H.130
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.128, A:T.129, A:H.130
- Water bridges: A:S.128
- Salt bridges: A:H.130
SO4.4: 3 residues within 4Å:- Chain A: G.40, D.41, K.42
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.41, A:K.42, A:K.42
SO4.5: 1 residues within 4Å:- Chain A: H.105
4 PLIP interactions:4 interactions with chain A- Water bridges: A:H.105, A:H.105, A:Q.106
- Salt bridges: A:H.105
SO4.9: 3 residues within 4Å:- Chain B: Y.37
- Ligands: NGA-GAL.8, NGA-GAL.8
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.37
SO4.10: 3 residues within 4Å:- Chain B: S.128, T.129, H.130
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.128, B:T.129, B:H.130
- Water bridges: B:S.128
- Salt bridges: B:H.130
SO4.11: 3 residues within 4Å:- Chain B: G.40, D.41, K.42
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.41, B:K.42, B:K.42
SO4.12: 1 residues within 4Å:- Chain B: H.105
4 PLIP interactions:4 interactions with chain B- Water bridges: B:H.105, B:H.105, B:Q.106
- Salt bridges: B:H.105
- 4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.6: 9 residues within 4Å:- Chain A: L.28, P.30, Y.72, Q.87
- Chain B: L.28, P.30, Y.72, Q.87
- Ligands: PG4.13
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:Y.72, A:Q.87, A:Q.87, B:Q.87, B:Q.87
PG4.7: 4 residues within 4Å:- Chain A: Y.14, Q.15, Y.107, T.129
2 PLIP interactions:2 interactions with chain A- Water bridges: A:Q.15, A:Y.149
PG4.13: 9 residues within 4Å:- Chain A: L.28, P.30, Y.72, Q.87
- Chain B: L.28, P.30, Y.72, Q.87
- Ligands: PG4.6
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:Y.72, A:Q.87, A:Q.87, B:Q.87, B:Q.87
PG4.14: 4 residues within 4Å:- Chain B: Y.14, Q.15, Y.107, T.129
1 PLIP interactions:1 interactions with chain B- Water bridges: B:Q.15
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sulzenbacher, G. et al., Crystal Structure of the Galnac/Gal-Specific Agglutinin from the Phytopathogenic Ascomycete Sclerotinia Sclerotiorum Reveals Novel Adaptation of a Beta-Trefoil Domain. J.Mol.Biol. (2010)
- Release Date
- 2010-05-26
- Peptides
- AGGLUTININ: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NGA- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sulzenbacher, G. et al., Crystal Structure of the Galnac/Gal-Specific Agglutinin from the Phytopathogenic Ascomycete Sclerotinia Sclerotiorum Reveals Novel Adaptation of a Beta-Trefoil Domain. J.Mol.Biol. (2010)
- Release Date
- 2010-05-26
- Peptides
- AGGLUTININ: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A