SMTL ID : 2a1w.3 (5 other biounits)

Anti-cocaine antibody 7.5.21, crystal form I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-oligomer

Ligands

14 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.31, S.32, S.97, H.98 Chain D: Y.108 6 PLIP interactions: 3 interactions with chain A, 1 interactions with chain C, 2 interactions with chain D Hydrogen bonds: A:S.32, D:Y.108, D:Y.108 Salt bridges: A:K.31, A:H.98, C:K.31 SO4.2: 4 residues within 4Å: Chain A: T.187, D.189, E.190, R.193 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.187, A:E.190 Salt bridges: A:R.193 SO4.3: 4 residues within 4Å: Chain C: K.31, S.32, S.97, H.98 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.32 Salt bridges: C:K.31, C:H.98 SO4.4: 4 residues within 4Å: Chain C: N.150, T.202, H.203, K.204 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:N.150, C:T.202, C:K.204 Water bridges: C:T.205 SO4.5: 3 residues within 4Å: Chain D: F.27, T.28, Y.32 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:T.28, D:T.28, D:Y.32 SO4.6: 7 residues within 4Å: Chain D: R.87, S.88, E.89 Chain H: R.87, S.88, E.89 Ligands: SO4.13 9 PLIP interactions: 4 interactions with chain D, 5 interactions with chain H Hydrogen bonds: D:S.88, D:E.89, H:S.88, H:E.89 Water bridges: D:S.88, H:S.88, H:S.88 Salt bridges: D:R.87, H:R.87 SO4.7: 6 residues within 4Å: Chain D: P.14, S.88, S.122, S.123 Chain H: R.87, E.89 6 PLIP interactions: 4 interactions with chain D, 2 interactions with chain H Hydrogen bonds: D:S.88, D:S.123, D:S.123 Water bridges: D:S.123, H:R.87 Salt bridges: H:R.87 SO4.8: 5 residues within 4Å: Chain E: K.31, S.32, S.97, H.98 Chain H: Y.108 5 PLIP interactions: 1 interactions with chain G, 3 interactions with chain E, 1 interactions with chain H Salt bridges: G:K.31, E:K.31, E:H.98 Hydrogen bonds: E:S.32, H:Y.108 SO4.9: 4 residues within 4Å: Chain E: T.187, D.189, E.190, R.193 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:E.190 Salt bridges: E:R.193 SO4.10: 4 residues within 4Å: Chain G: K.31, S.32, S.97, H.98 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:S.32 Salt bridges: G:K.31, G:H.98 SO4.11: 4 residues within 4Å: Chain G: N.150, T.202, H.203, K.204 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:N.150, G:K.204 Water bridges: G:T.205 SO4.12: 3 residues within 4Å: Chain H: F.27, T.28, Y.32 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:T.28 SO4.13: 7 residues within 4Å: Chain D: R.87, S.88, E.89 Chain H: R.87, S.88, E.89 Ligands: SO4.6 9 PLIP interactions: 5 interactions with chain D, 4 interactions with chain H Hydrogen bonds: D:S.88, D:E.89, H:S.88, H:E.89 Water bridges: D:S.88, D:S.88, H:S.88 Salt bridges: D:R.87, H:R.87 SO4.14: 6 residues within 4Å: Chain D: R.87, E.89 Chain H: P.14, S.88, S.122, S.123 7 PLIP interactions: 3 interactions with chain D, 4 interactions with chain H Water bridges: D:R.87, D:E.89, H:S.123 Salt bridges: D:R.87 Hydrogen bonds: H:S.88, H:S.123, H:S.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozharski, E. et al., Flexibility Of Packing: Four Crystal Forms Of An Anti-Cocaine Antibody 7.5.21. To be Published

Release Date

2005-06-28

Peptides

immunoglobulin light chain kappa: ACEG
immunoglobulin heavy chain: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

C
M

E
L

G
M

B
H

D
I

F
H

H
I

immunoglobulin light chain kappa

immunoglobulin heavy chain

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