SMTL ID : 2a4e.1

Crystal structure of mouse cadherin-11 EC1-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.101, N.103, D.133, D.135, S.142, D.188 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.103, A:D.133, A:D.135, A:S.142, A:D.188 CA.2: 9 residues within 4Å: Chain A: E.12, R.66, E.67, D.99, I.100, D.102, N.103, D.135 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.12, A:E.67, A:D.99, A:I.100, A:D.102 CA.3: 6 residues within 4Å: Chain A: E.12, E.13, D.65, E.67, D.102 Ligands: CA.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.12, A:E.13, A:D.65, A:E.67, A:D.102 CA.4: 6 residues within 4Å: Chain B: N.101, N.103, D.133, D.135, S.142, D.188 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:N.103, B:D.133, B:D.135, B:S.142, B:D.188 CA.5: 9 residues within 4Å: Chain B: E.12, R.66, E.67, D.99, I.100, D.102, N.103, D.135 Ligands: CA.6 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.12, B:E.67, B:D.99, B:I.100, B:D.102 CA.6: 6 residues within 4Å: Chain B: E.12, E.13, D.65, E.67, D.102 Ligands: CA.5 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.12, B:E.13, B:D.65, B:E.67, B:D.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, S.D. et al., Type II cadherin ectodomain structures: implications for classical cadherin specificity. Cell(Cambridge,Mass.) (2006)

Release Date

2006-04-25

Peptides

Cadherin-11: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Cadherin-11