SMTL ID : 2a6v.1 (1 other biounit)

Crystal structure of Emp46p carbohydrate recognition domain (CRD), potassium-bound form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

2 x K: POTASSIUM ION(Non-covalent)

K.1: 4 residues within 4Å: Chain A: Y.128, I.138, E.139, S.141 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:I.138, A:E.139, A:S.141, H2O.12, H2O.33 K.2: 2 residues within 4Å: Chain A: L.26, W.29 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:L.26, A:W.29, H2O.223

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: C.147, L.148, M.176, R.179, V.180, C.181 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.176, A:M.176 Water bridges: A:V.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Satoh, T. et al., Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p. J.Biol.Chem. (2006)

Release Date

2006-01-31

Peptides

Emp46p: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Emp46p

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