SMTL ID : 2aam.1 (5 other biounits)

Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x UNL: UNKNOWN LIGAND

UNL.1: 11 residues within 4Å: Chain A: L.27, Q.28, D.46, D.50, G.51, Y.75, E.82, Y.84, R.85, E.284 Ligands: GOL.4 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.28, A:Y.84, A:R.85, A:E.284 Water bridges: A:G.51, A:Y.75, A:N.110

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: N.189, E.211, N.212, R.229 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.211, A:R.229, A:R.229 Water bridges: A:N.189, A:N.189, A:G.190, A:E.211 GOL.3: 3 residues within 4Å: Chain A: Q.152, E.153, G.154 No protein-ligand interaction detected (PLIP) GOL.4: 9 residues within 4Å: Chain A: Y.25, Y.75, W.107, D.142, Q.188, E.211, Y.248, L.285 Ligands: UNL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.188, A:Q.188 Water bridges: A:N.189 GOL.5: 2 residues within 4Å: Chain A: E.56, R.130 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.56 GOL.6: 5 residues within 4Å: Chain A: Y.93, T.96, L.100, G.101, Y.111 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.100 GOL.7: 2 residues within 4Å: Chain A: D.129, R.179 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.179, A:R.179 GOL.8: 2 residues within 4Å: Chain A: I.259, E.292 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (tm1410) from THERMOTOGA MARITIMA at 2.20 A resolution. To be published

Release Date

2005-07-26

Peptides

Hypothetical protein TM1410: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypothetical protein TM1410

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